miRBase entry: loc-mir-429

Stem-loop loc-mir-429


Accession
MI0045987
Description
Lepisosteus oculatus loc-mir-429 precursor miRNA


Sequence


ggccaaagcaugaccugccuguugauagacGUCUUACCAGACAAGGUUAGAucuagcuauuccugucUAAUACUGUCUGGUAAUGCCGUucauuacguggcacaaucccugcgcuucgc
(((....(((.((..(((((((.(((.((((.(((((((((((..(((((((..((......)))))))))..)))))))))).).)))).)))))).))))...))..))))))....

Structure
----   caaa   -u  -cc    -   u   a    U -          AG       cu  cu 
    ggc    gca  ga   ugcc ugu gau gacG C UUACCAGACA  GUUAGAu  ag  a
    |||    |||  ||   |||| ||| ||| |||| | ||||||||||  |||||||  ||   
    ucg    cgu  cu   acgg gca uua uUGC G AAUGGUCUGU  UAAUcug  uc  u
cgcu   ----   cc  aac    u   -   c    C U          CA       --  cu 


Annotation confidence Not enough data
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Genome context
LG25: 13737285-13737343 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from loc-mir-429
Name Accession Chromosome Start End Strand Confidence




Database links

Mature loc-miR-429-5p

Accession MIMAT0070614
Description Lepisosteus oculatus loc-miR-429-5p mature miRNA
Sequence 31 - GUCUUACCAGACAAGGUUAGA - 51
Evidence not_experimental

Mature loc-miR-429-3p

Accession MIMAT0070613
Description Lepisosteus oculatus loc-miR-429-3p mature miRNA
Sequence 68 - UAAUACUGUCUGGUAAUGCCGU - 89
Evidence not_experimental

References