Accession
MI0045988
Description
Lepisosteus oculatus
loc-mir-200b precursor miRNA
Sequence
cuggcgaggauagacauggcucucgauggaCAUCUUACUAGACAGUGCUGGAuuguacaccuggguucUAACACUGUCUGGUAACGAUGUUuacagggugacccaagggcugccacacucc
.((((.((........(.(((((.(.(((((((((((((((((((((.((((.(.((....)).).)))).))))))))))))).)))))))))))))).)........))))))......
.((((.((........(.(((((.(.(((((((((((((((((((((.((((.(.((....)).).)))).))))))))))))).)))))))))))))).)........))))))......
Structure
-----c g gauagaca g c a - C u g c
uggc ag u gcucu g uggaCAUC UUACUAGACAGUG UGGA u ua a
|||| || | ||||| | |||||||| ||||||||||||| |||| | ||
accg uc a uggga c auUUGUAG AAUGGUCUGUCAC AUcu g gu c
ccucac - gggaaccc g - - C A u g c
Annotation confidence
Not enough data
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Genome context
LG25: 13733478-13733538 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from loc-mir-200b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-miR-200b-5p
| Accession | MIMAT0070616 |
| Description | Lepisosteus oculatus loc-miR-200b-5p mature miRNA |
| Sequence | 31 - CAUCUUACUAGACAGUGCUGGA - 52 |
| Evidence | not_experimental |
Mature loc-miR-200b-3p
| Accession | MIMAT0070615 |
| Description | Lepisosteus oculatus loc-miR-200b-3p mature miRNA |
| Sequence | 69 - UAACACUGUCUGGUAACGAUGUU - 91 |
| Evidence | not_experimental |
References
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