Accession
MI0045989
Description
Lepisosteus oculatus
loc-mir-200a precursor miRNA
Sequence
acgcuuccagcucgguuggauggccauugaCAUCUUACUAGGCAGCAUUGGAugugaucucccuuucUAAUACUGCCUGGUAAUGAUGAUgauggcucucugcuuucaucggaggacagc
.....((((((...)))))).(((((((..(((((((((((((((.((((((.............)))))).))))))))))).))))..)))))))..((((((((...))))).))).
.....((((((...)))))).(((((((..(((((((((((((((.((((((.............)))))).))))))))))).))))..)))))))..((((((((...))))).))).
Structure
--acgcuuccagcucgguuggau ga - C uguga
ggccauu CAUC UUACUAGGCAG AUUGGA u
||||||| |||| ||||||||||| |||||| c
ucgguag GUAG AAUGGUCCGUC UAAUcu u
cgacaggaggcuacuuucgucuc UA U A uuccc
Annotation confidence
Not enough data
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Genome context
LG25: 13732832-13732891 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from loc-mir-200a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-miR-200a-5p
| Accession | MIMAT0070618 |
| Description | Lepisosteus oculatus loc-miR-200a-5p mature miRNA |
| Sequence | 31 - CAUCUUACUAGGCAGCAUUGGA - 52 |
| Evidence | not_experimental |
Mature loc-miR-200a-3p
| Accession | MIMAT0070617 |
| Description | Lepisosteus oculatus loc-miR-200a-3p mature miRNA |
| Sequence | 68 - UAAUACUGCCUGGUAAUGAUGAU - 90 |
| Evidence | not_experimental |
References
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