Accession
MI0045996
Description
Lepisosteus oculatus
loc-mir-1-1 precursor miRNA
Sequence
cgggcugucauuuauccgccuauccggaguACAUACUUCUUUAUGUACCCAUAuggacauaugaaagcuaUGGAAUGUAAAGAAGUAUGUAUuuuugaucaggcacugagcgacgaagccag
..(((((((.((((...(((((((.(((((((((((((((((((((..(((((.(............)))))).))))))))))))))))))))).))).))))..)))).)))..))))..
..(((((((.((((...(((((((.(((((((((((((((((((((..(((((.(............)))))).))))))))))))))))))))).))).))))..)))).)))..))))..
Structure
cg -- a ucc - c AC u gacau ggcu guc uuua gccu auc ggaguACAUACUUCUUUAUGU CCAUA g a |||| ||| |||| |||| ||| ||||||||||||||||||||| ||||| | ccga cag gagu cgga uag uuuUAUGUAUGAAGAAAUGUA GGUau c u ga ag c -ca c u -A - gaaag
Annotation confidence
Not enough data
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Genome context
LG9: 563078-563139 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from loc-mir-1-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-miR-1-1-5p
| Accession | MIMAT0070627 |
| Description | Lepisosteus oculatus loc-miR-1-1-5p mature miRNA |
| Sequence | 31 - ACAUACUUCUUUAUGUACCCAUA - 53 |
| Evidence | not_experimental |
Mature loc-miR-1-3p
| Accession | MIMAT0070623 |
| Description | Lepisosteus oculatus loc-miR-1-3p mature miRNA |
| Sequence | 71 - UGGAAUGUAAAGAAGUAUGUAU - 92 |
| Evidence | not_experimental |
References
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