Accession
MI0046000
Description
Lepisosteus oculatus
loc-let-7c-5 precursor miRNA
Sequence
aagaaggagguauuccgugucucugcgaggUGAGGUAGUAGGUUGUAUAGUUuggugggaggaauuacauccuauucaggugauaaCUAUACAGUCUAUUGCCUUCCUcgacggucaugcaugcagcaagagagaug
.....(((.....)))((.(((((.(((((.(((((((((((((((((((((...((((((((......)))).))))......)))))))))))))))))))))))))).......(((.....)))))))).)).
.....(((.....)))((.(((((.(((((.(((((((((((((((((((((...((((((((......)))).))))......)))))))))))))))))))))))))).......(((.....)))))))).)).
Structure
aagaaggagguauucc g -----------------g U ---ugg - au
gu ucucu cgagg GAGGUAGUAGGUUGUAUAGUU uggg agga u
|| ||||| ||||| ||||||||||||||||||||| |||| ||||
ua agaga gcUCC UUCCGUUAUCUGACAUAUCaa acuu uccu a
---------------g g acgacguacguacuggca - uagugg a ac
Annotation confidence
Not enough data
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Genome context
LG3: 23239112-23239188 []
Clustered miRNAs
1 other miRNA is < 10 kb from loc-let-7c-5
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-let-7c-5p
| Accession | MIMAT0070634 |
| Description | Lepisosteus oculatus loc-let-7c-5p mature miRNA |
| Sequence | 31 - UGAGGUAGUAGGUUGUAUAGUU - 52 |
| Evidence | not_experimental |
Mature loc-let-7c-5-3p
| Accession | MIMAT0070635 |
| Description | Lepisosteus oculatus loc-let-7c-5-3p mature miRNA |
| Sequence | 87 - CUAUACAGUCUAUUGCCUUCCU - 108 |
| Evidence | not_experimental |
References
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