Accession
MI0046003
Description
Lepisosteus oculatus
loc-let-7e precursor miRNA
Sequence
uacauguauucagaaauugcucuggcagugUGAGGUAGUAGAUUGUAUAGUUguaggguagugauuuugcccucuuuggaagauaaCUAUACAAUCUAUUGCCUUCCCugaagagcagaaaagcagcauuauccauu
...((((.........(((((((..(((.(.((((((((((((((((((((((((((((((.....))))))).........))))))))))))))))))))))).)))).))))))).......))))........
...((((.........(((((((..(((.(.((((((((((((((((((((((((((((((.....))))))).........))))))))))))))))))))))).)))).))))))).......))))........
Structure
-----uac auucagaaa gg u U --------- u
augu uugcucu cag g GAGGUAGUAGAUUGUAUAGUUgu aggguag g
|||| ||||||| ||| | ||||||||||||||||||||||| ||||||| a
uacg gacgaga guC C UUCCGUUAUCUAACAUAUCaaua ucccguu u
uuaccuau --acgaaaa -a - C gaagguuuc u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
LG5: 47690750-47690826 []
Clustered miRNAs
2 other miRNAs are < 10 kb from loc-let-7e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature loc-let-7e-5p
| Accession | MIMAT0070640 |
| Description | Lepisosteus oculatus loc-let-7e-5p mature miRNA |
| Sequence | 31 - UGAGGUAGUAGAUUGUAUAGUU - 52 |
| Evidence | not_experimental |
Mature loc-let-7e-3p
| Accession | MIMAT0070641 |
| Description | Lepisosteus oculatus loc-let-7e-3p mature miRNA |
| Sequence | 87 - CUAUACAAUCUAUUGCCUUCCC - 108 |
| Evidence | not_experimental |
References
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