Stem-loop lch-mir-2188

Accession

MI0046013

Description

Latimeria chalumnae lch-mir-2188 precursor miRNA

Sequence

uccauccaggagaauaucagaccugugggaAAGGUCCAACCUCACAUGUCCUguauuaaauaaggaggGAUAUAUGUGGUCAGACCUAUCccacaggcucuguauucuuacaugcaugcu
..(((.((.(((((((.(((((((((((((.(((((..(((.((.(((((((...((....))...))))))).)).)))..))))).))))))))).)))))))))))...)).)))..

Structure

uc   c  --g       u    -         A     CA   U  C       gua  a 
  cau ca   gagaaua caga ccuguggga AGGUC  ACC CA AUGUCCU   uu a
  ||| ||   ||||||| |||| ||||||||| |||||  ||| || |||||||   ||  
  gua gu   uucuuau gucu ggacaccCU UCCAG  UGG GU UAUAGgg   aa a
uc   c  aca       -    c         A     AC   U  A       agg  u 

Annotation confidence Not enough data

Genome context

JH127420.1: 655957-656016 [+]

Mature lch-miR-2188-5p

• Accession: MIMAT0070656
• Description: Latimeria chalumnae lch-miR-2188-5p mature miRNA
• Sequence: 31 - AAGGUCCAACCUCACAUGUCCU - 52
• Evidence: not_experimental

Mature lch-miR-2188-3p

• Accession: MIMAT0070657
• Description: Latimeria chalumnae lch-miR-2188-3p mature miRNA
• Sequence: 69 - GAUAUAUGUGGUCAGACCUAUC - 90
• Evidence: not_experimental

References