Accession
MI0046034
Description
Latimeria chalumnae
lch-mir-221 precursor miRNA
Sequence
gagggaggcuuauccaggucuugggcaugaACCUGGCAUACAAUGUAGAAUCCUGUguuagaauagcaacAGCUACAUUGUCUGCUGGGUUUCaggcuaccuggaagugcauauggacuguga
.......((...(((((((....(((.(((((((((((.(((((((((....((((((((...)))).))))))))))))).))))))).)))).))))))))))...)).............
.......((...(((((((....(((.(((((((((((.(((((((((....((((((((...)))).))))))))))))).))))))).)))).))))))))))...)).............
Structure
------gagggag uua cuug a - U AAUC - g
gc uccaggu ggc ugaA CCUGGCA ACAAUGUAG CUGU guua
|| ||||||| ||| |||| ||||||| ||||||||| |||| |||| a
cg aggucca ucg aCUU GGGUCGU UGUUACAUC GAca cgau
agugucagguaua uga ---- g U C ---- a a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
JH127252.1: 53102-53164 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from lch-mir-221
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature lch-miR-221-5p
| Accession | MIMAT0070698 |
| Description | Latimeria chalumnae lch-miR-221-5p mature miRNA |
| Sequence | 31 - ACCUGGCAUACAAUGUAGAAUCCUGU - 56 |
| Evidence | not_experimental |
Mature lch-miR-221-3p
| Accession | MIMAT0070697 |
| Description | Latimeria chalumnae lch-miR-221-3p mature miRNA |
| Sequence | 71 - AGCUACAUUGUCUGCUGGGUUUC - 93 |
| Evidence | not_experimental |
References
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