Stem-loop lch-mir-199-1

Accession

MI0046058

Description

Latimeria chalumnae lch-mir-199-1 precursor miRNA

Sequence

acccguuuccaguugguccugcuccgucggCCCAGUGUUCAGACUACCUGUUCaggacaauacuguuguACAGUAGUCUGCACAUUGGUUAgacugggcaugggaaagcagcggcauggaa
..((((..((.((((.((((((((.(((...(((((((.((((((((.(((....((((....))))..))))))))))).)))))))...))).))))..))))...)))))).))))..

Structure

ac    uu  a    --g    --    c   ggC       U        C   UCag    a 
  ccgu  cc guug   uccu  gcuc guc   CCAGUGU CAGACUAC UGU    gaca u
  ||||  || ||||   ||||  |||| |||   ||||||| |||||||| |||    ||||  
  ggua  gg cgac   aggg  cggg cag   GGUUACA GUCUGAUG ACA    uugu a
aa    -c  -    gaa    ua    u   AUU       C        -   --ug    c 

Annotation confidence Not enough data

Genome context

JH127017.1: 811620-811680 []

Clustered miRNAs

1 other miRNA is < 10 kb from lch-mir-199-1

Mature lch-miR-199-5p

• Accession: MIMAT0070738
• Description: Latimeria chalumnae lch-miR-199-5p mature miRNA
• Sequence: 31 - CCCAGUGUUCAGACUACCUGUUC - 53
• Evidence: not_experimental

Mature lch-miR-199-3p

• Accession: MIMAT0070737
• Description: Latimeria chalumnae lch-miR-199-3p mature miRNA
• Sequence: 70 - ACAGUAGUCUGCACAUUGGUUA - 91
• Evidence: not_experimental

References