miRBase entry: lch-mir-196-1

Stem-loop lch-mir-196-1


Accession
MI0046061
Description
Latimeria chalumnae lch-mir-196-1 precursor miRNA


Sequence


aacuaacguggacuaaacugaagugugauuUAGGUAGUUUCAUGUUGUUGGGgcuccaaauuuaucuCUAUAACAAGAAACUGCCUGAAuuacuccaguuaaaaucuucacacgucagu
.(((.(((((((...(((((....(((((((((((((((((.((((((.((((...........)))).)))))).)))))))))))))))))..))))).......)).))))).)))

Structure
a   a     -  ----cua     aagu                 A      U    cucc 
 acu acgug ga       aacug    gugauuUAGGUAGUUUC UGUUGU GGGg    a
 ||| ||||| ||       |||||    ||||||||||||||||| |||||| ||||    a
 uga ugcac cu       uugac    cauuAAGUCCGUCAAAG ACAAUA Cucu    a
-   c     a  ucuaaaa     --cu                 A      U    auuu 


Annotation confidence Not enough data
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Genome context
JH126711.1: 2060364-2060422 []

Database links

Mature lch-miR-196-5p

Accession MIMAT0070741
Description Latimeria chalumnae lch-miR-196-5p mature miRNA
Sequence 31 - UAGGUAGUUUCAUGUUGUUGGG - 52
Evidence not_experimental

Mature lch-miR-196-1-3p

Accession MIMAT0070743
Description Latimeria chalumnae lch-miR-196-1-3p mature miRNA
Sequence 68 - CUAUAACAAGAAACUGCCUGAA - 89
Evidence not_experimental

References