Stem-loop lch-mir-143

Accession

MI0046091

Description

Latimeria chalumnae lch-mir-143 precursor miRNA

Sequence

ugcuaaacccaguuaugucucccagcccgaGGUGCAGUGCUGCAUCUCUGGucaguugugagucUGAGAUGAAGCACUGUAGCUCaggaagggggaaaccuacagcaaaggacca
((((.......((....((((((..((.(((.(((((((((.((((((.(((((....))).)).)))))).))))))))).))).))..)))))).....))))))........

Structure

--------    aaaccca  -uaug      ag  c   G         G      U  -   g 
        ugcu       gu     ucuccc  cc gaG UGCAGUGCU CAUCUC GG uca u
        ||||       ||     ||||||  || ||| ||||||||| |||||| || |||  
        acga       ca     aggggg  gg CUC AUGUCACGA GUAGAG cu agu u
accaggaa    -------  uccaa      aa  a   G         A      U  g   g 

Annotation confidence Not enough data

Genome context

JH127531.1: 330353-330407 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from lch-mir-143

Mature lch-miR-143-5p

• Accession: MIMAT0070799
• Description: Latimeria chalumnae lch-miR-143-5p mature miRNA
• Sequence: 31 - GGUGCAGUGCUGCAUCUCUGG - 51
• Evidence: not_experimental

Mature lch-miR-143-3p

• Accession: MIMAT0070798
• Description: Latimeria chalumnae lch-miR-143-3p mature miRNA
• Sequence: 65 - UGAGAUGAAGCACUGUAGCUC - 85
• Evidence: not_experimental

References