Accession
MI0046113
Description
Latimeria chalumnae
lch-mir-454a precursor miRNA
Sequence
guggcacugcacuacauccucaaagaaaagACCCUAUCAAUACUGCCUCUGCUuuuagaaauaguggagUAGUGCAAUAUUGCUUAUAGGGUCUugaauuugagggucuacuucgaacacccga
(((......)))...(((((((((...(((((((((((((((.(((..(((((((..........))))))).))).)))))...))))))))))...))))))))).....(((......)))
(((......)))...(((((((((...(((((((((((((((.(((..(((((((..........))))))).))).)))))...))))))))))...))))))))).....(((......)))
Structure
--guggcacugcacuac gaa --- C CU uaga
auccucaaa aagACCCUAU CAAUA UGC CUGCUuu a
||||||||| |||||||||| ||||| ||| |||||||
ugggaguuu uUCUGGGAUA GUUAU ACG GAUgagg a
agcccacaagcuucauc aag UUC A -U ugau
Annotation confidence
Not enough data
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Genome context
JH126620.1: 795127-795190 []
Clustered miRNAs
2 other miRNAs are < 10 kb from lch-mir-454a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature lch-miR-454a-5p
| Accession | MIMAT0070836 |
| Description | Latimeria chalumnae lch-miR-454a-5p mature miRNA |
| Sequence | 31 - ACCCUAUCAAUACUGCCUCUGCU - 53 |
| Evidence | not_experimental |
Mature lch-miR-454a-3p
| Accession | MIMAT0070835 |
| Description | Latimeria chalumnae lch-miR-454a-3p mature miRNA |
| Sequence | 70 - UAGUGCAAUAUUGCUUAUAGGGUCU - 94 |
| Evidence | not_experimental |
References
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