Stem-loop lch-mir-449b

Accession

MI0046145

Description

Latimeria chalumnae lch-mir-449b precursor miRNA

Sequence

caaagccaauuaaaaguaugugcggugauuAGGCAGUGUAAUGUUAGCUGACugugauuuacauauGAGCAACUACAUGCACUAUcauauuugcgcaugaacaauguuucucacgaaga
................(((((((((((((.(((((.((((..(((.(((.(.((((.....))))).))))))))))))).)))))))...))))))))....................

Structure

----caaagccaauuaaaag        ---     u  -   G    AU   A   G C    a 
                    uaugugcg   gugau AG GCA UGUA  GUU GCU A ugug u
                    ||||||||   ||||| || ||| ||||  ||| ||| | |||| u
                    guacgcgu   uacUA UC CGU ACAU  CAA CGA u auac u
agaagcacucuuuguaacaa        uua     -  A   -    --   -   G -    a 

Annotation confidence Not enough data

Genome context

JH127011.1: 783929-783987 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from lch-mir-449b

Mature lch-miR-449b-5p

• Accession: MIMAT0070889
• Description: Latimeria chalumnae lch-miR-449b-5p mature miRNA
• Sequence: 31 - AGGCAGUGUAAUGUUAGCUGAC - 52
• Evidence: not_experimental

Mature lch-miR-449b-3p

• Accession: MIMAT0070890
• Description: Latimeria chalumnae lch-miR-449b-3p mature miRNA
• Sequence: 67 - GAGCAACUACAUGCACUAU - 85
• Evidence: not_experimental

References