Accession
MI0046146
Description
Latimeria chalumnae
lch-mir-449a precursor miRNA
Sequence
aauugagaaaaagcaaggaaugcuucaguuAGGCAGUGUAUUGCUAGCUGGCUGUUguguauuugacaggucaaCAGCUGCUGGGUACACUCCACAuugcugcauucaaugcacaagcguggaaau
............(((..((((((..((((..((.(((((((..(((((.(((((((((((.....)))...))))))))))))))))))))))..))))..))))))..)))..............
............(((..((((((..((((..((.(((((((..(((((.(((((((((((.....)))...))))))))))))))))))))))..))))..))))))..)))..............
Structure
--aauugagaaaaa ag uu uA C UG U --- a
gca gaaugc cagu GG AGUGUAU CUAGC GGCUGUUg ugu u
||| |||||| |||| || ||||||| ||||| |||||||| ||| u
cgu cuuacg guuA CC UCACAUG GGUCG UCGACaac aca u
uaaaggugcgaaca aa uc CA - -- - ugg g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
JH127011.1: 782676-782741 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from lch-mir-449a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature lch-miR-449a-5p
| Accession | MIMAT0070891 |
| Description | Latimeria chalumnae lch-miR-449a-5p mature miRNA |
| Sequence | 31 - AGGCAGUGUAUUGCUAGCUGGCUGUU - 56 |
| Evidence | not_experimental |
Mature lch-miR-449a-3p
| Accession | MIMAT0070892 |
| Description | Latimeria chalumnae lch-miR-449a-3p mature miRNA |
| Sequence | 75 - CAGCUGCUGGGUACACUCCACA - 96 |
| Evidence | not_experimental |
References
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