Accession
MI0046167
Description
Latimeria chalumnae
lch-mir-27a-1 precursor miRNA
Sequence
caucuucuuccauggagcucugaaagagacAGGACUUAGCUAGCCUUGUGAACAgaucuuugauaagcacaugUUCACAGUGGCUAAGUUCUGCcacuuuggagcaagucagcuggaaccaaug
.......((((((((.(((((.((((.(.(((((((((((((...(((((((((...(((....)))....)))))))))))))))))))))).).)))))))))...)))..)))))......
.......((((((((.(((((.((((.(.(((((((((((((...(((((((((...(((....)))....)))))))))))))))))))))).).)))))))))...)))..)))))......
Structure
caucuuc -- --a g a a GCC -gau u
uucca ugg gcucu aaag g cAGGACUUAGCUA UUGUGAACA cuu g
||||| ||| ||||| |||| | ||||||||||||| ||||||||| |||
aaggu acu cgagg uuuc c GUCUUGAAUCGGU GACACUUgu gaa a
-guaacc cg gaa - a C --- acac u
Annotation confidence
Not enough data
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Genome context
JH126762.1: 1808447-1808510 []
Clustered miRNAs
2 other miRNAs are < 10 kb from lch-mir-27a-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature lch-miR-27a-1-5p
| Accession | MIMAT0070929 |
| Description | Latimeria chalumnae lch-miR-27a-1-5p mature miRNA |
| Sequence | 31 - AGGACUUAGCUAGCCUUGUGAACA - 54 |
| Evidence | not_experimental |
Mature lch-miR-27a-3p
| Accession | MIMAT0070927 |
| Description | Latimeria chalumnae lch-miR-27a-3p mature miRNA |
| Sequence | 74 - UUCACAGUGGCUAAGUUCUGC - 94 |
| Evidence | not_experimental |
References
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