miRBase entry: lch-mir-24-3

Stem-loop lch-mir-24-3


Accession
MI0046172
Description
Latimeria chalumnae lch-mir-24-3 precursor miRNA


Sequence


caguucuacugauccugggcuuugccuccuGUGCCUACUGAGCUGACAUUCAGUuuuaugaauauacUGGCUCAGUUCAGCAGGAACAGgaguugagcuccauuuucgcacuucaccuc
((((...))))....(((((((...(((((((.(((.(((((((((...(((((...........))))).))))))))).))).)))))))..)))).))).................

Structure
--caguucuacugaucc   -    ugc       G   A         CAU     uuua 
                 ugg gcuu   cuccuGU CCU CUGAGCUGA   UCAGU    u
                 ||| ||||   ||||||| ||| |||||||||   |||||    g
                 acc cgag   gagGACA GGA GACUUGACU   GGUca    a
cuccacuucacgcuuuu   u    -uu       A   C         --C     uaua 


Annotation confidence Not enough data
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Genome context
JH126758.1: 373059-373117 []
Clustered miRNAs
2 other miRNAs are < 10 kb from lch-mir-24-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature lch-miR-24-3-5p

Accession MIMAT0070937
Description Latimeria chalumnae lch-miR-24-3-5p mature miRNA
Sequence 31 - GUGCCUACUGAGCUGACAUUCAGU - 54
Evidence not_experimental

Mature lch-miR-24-3p

Accession MIMAT0070935
Description Latimeria chalumnae lch-miR-24-3p mature miRNA
Sequence 68 - UGGCUCAGUUCAGCAGGAACAG - 89
Evidence not_experimental

References