Accession
MI0046178
Description
Latimeria chalumnae
lch-mir-23a-1 precursor miRNA
Sequence
uaauggaugaauaagcagcugugauuggugGGAUUCCUGGCAGAGUGAUUUggguuucucugcuacaaaaaaaAUCACAUUGCCAGGGAUUUCCAaccaggcacaagccccgcccucgcugcagu
..............(((((((((..((((((((((((((((((.(((((((....................))))))).)))))))))).)))).))))..))))............)))))...
..............(((((((((..((((((((((((((((((.(((((((....................))))))).)))))))))).)))).))))..))))............)))))...
Structure
uaauggaugaauaa ------------ au - - A ggguuucuc
gcagc ugug uggu gGGA UUCCUGGCAG GUGAUUU u
||||| |||| |||| |||| |||||||||| |||||||
cgucg acac acca CCUU AGGGACCGUU CACUAaa g
-----------uga cucccgccccga gg A U A aaaaacauc
Annotation confidence
Not enough data
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Genome context
JH126762.1: 1811296-1811360 []
Clustered miRNAs
2 other miRNAs are < 10 kb from lch-mir-23a-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature lch-miR-23a-1-5p
| Accession | MIMAT0070945 |
| Description | Latimeria chalumnae lch-miR-23a-1-5p mature miRNA |
| Sequence | 31 - GGAUUCCUGGCAGAGUGAUUU - 51 |
| Evidence | not_experimental |
Mature lch-miR-23a-3p
| Accession | MIMAT0070940 |
| Description | Latimeria chalumnae lch-miR-23a-3p mature miRNA |
| Sequence | 74 - AUCACAUUGCCAGGGAUUUCCA - 95 |
| Evidence | not_experimental |
References
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