Accession
MI0046188
Description
Latimeria chalumnae
lch-mir-17d precursor miRNA
Sequence
cauuggcauggauaugagcuuuagcagcgcUAAAGUGCUUAUAGUGCAGGUAGuguuuaguaaucuACUGCAUUGUGAGCACUUAAAGUucugcuagcuagugggcaucaacuuggaaa
(((((((..............((((((.(((.(((((((((((((((((.(((.(((....)))))))))))))))))))))))..))).)))))))))))))................
(((((((..............((((((.(((.(((((((((((((((((.(((.(((....)))))))))))))))))))))))..))).)))))))))))))................
Structure
---------------- auggauaugagcuu c -A G u u
cauuggc uagcag gcU AAGUGCUUAUAGUGCAG UAG guu a
||||||| |||||| ||| ||||||||||||||||| ||| |||
gugaucg aucguc UGA UUCACGAGUGUUACGUC Auc uaa g
aaagguucaacuacgg -------------- u AA - - u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
JH129267.1: 172558-172616 []
Clustered miRNAs
5 other miRNAs are < 10 kb from lch-mir-17d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature lch-miR-17d-5p
| Accession | MIMAT0070963 |
| Description | Latimeria chalumnae lch-miR-17d-5p mature miRNA |
| Sequence | 31 - UAAAGUGCUUAUAGUGCAGGUAG - 53 |
| Evidence | not_experimental |
Mature lch-miR-17d-3p
| Accession | MIMAT0070964 |
| Description | Latimeria chalumnae lch-miR-17d-3p mature miRNA |
| Sequence | 67 - ACUGCAUUGUGAGCACUUAAAGU - 89 |
| Evidence | not_experimental |
References
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