Accession
MI0046189
Description
Latimeria chalumnae
lch-mir-18-2 precursor miRNA
Sequence
auuagcacaaaguucaaguguaucuuguggUAAGGUGCAUCUAGCGCAGUUAGugagguagcuuagaaucUACUGCCCUAAAUGCUCCUUCUGGCacaagaaacuacauauccaugauaaggugu
....((((.....(((.((((((((((((.(((((.((((.(((.(((((...((((....))))......))))).))).)))).)))..)).)))))))...))))).....)))....))))
....((((.....(((.((((((((((((.(((((.((((.(((.(((((...((((....))))......))))).))).)))).)))..)).)))))))...))))).....)))....))))
Structure
auua aaagu ----a --- g -- U C C ---UAG g
gcac uca gugua ucuugug UA AGG GCAU UAG GCAGU ugag u
|||| ||| ||||| ||||||| || ||| |||| ||| ||||| ||||
ugug agu uacau agaacaC GU UCC CGUA AUC CGUCA auuc a
---- -gaau accua caa G CU U A C Ucuaag g
Annotation confidence
Not enough data
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Genome context
JH126623.1: 2114050-2114114 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from lch-mir-18-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature lch-miR-18-2-5p
| Accession | MIMAT0070965 |
| Description | Latimeria chalumnae lch-miR-18-2-5p mature miRNA |
| Sequence | 31 - UAAGGUGCAUCUAGCGCAGUUAG - 53 |
| Evidence | not_experimental |
Mature lch-miR-18-2-3p
| Accession | MIMAT0070966 |
| Description | Latimeria chalumnae lch-miR-18-2-3p mature miRNA |
| Sequence | 71 - UACUGCCCUAAAUGCUCCUUCUGGC - 95 |
| Evidence | not_experimental |
References
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