Accession
MI0046190
Description
Latimeria chalumnae
lch-mir-18-1 precursor miRNA
Sequence
guugucuaaaguggggucugcuuuuugugcUAAGGUGCAUCUAGUGCAGAUAGugaaguagauuagcaucuACUGCCCUAAGUGCUCCUUCUGGCauaagaagcuaaaauucuuuuuugagguga
......(((((.(((((..((((((((((((((((.((((.(((.((((.(((((..(.....)..)).))))))).))).)))).)))..)))))))))))))....))))).)))))......
......(((((.(((((..((((((((((((((((.((((.(((.((((.(((((..(.....)..)).))))))).))).)))).)))..)))))))))))))....))))).)))))......
Structure
guuguc u --cu -- U C U A - aa u
uaaag ggggu gcuuuuugugcUA AGG GCAU UAG GCAG UAG ug g a
||||| ||||| ||||||||||||| ||| |||| ||| |||| ||| || | g
guuuu ucuua cgaagaauaCGGU UCC CGUG AUC CGUC Auc ac u a
agugga u aaau CU U A C - u ga u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
JH129267.1: 172869-172933 []
Clustered miRNAs
5 other miRNAs are < 10 kb from lch-mir-18-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature lch-miR-18-1-5p
| Accession | MIMAT0070967 |
| Description | Latimeria chalumnae lch-miR-18-1-5p mature miRNA |
| Sequence | 31 - UAAGGUGCAUCUAGUGCAGAUAG - 53 |
| Evidence | not_experimental |
Mature lch-miR-18-1-3p
| Accession | MIMAT0070968 |
| Description | Latimeria chalumnae lch-miR-18-1-3p mature miRNA |
| Sequence | 72 - ACUGCCCUAAGUGCUCCUUCUGGC - 95 |
| Evidence | not_experimental |
References
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