Accession
MI0046194
Description
Latimeria chalumnae
lch-mir-16c precursor miRNA
Sequence
acuguugaaaugaguuugucagcaguacuuUAGCAGCACGUAAAUAUUGGAGuucagaauugcugcuaucuCCAGUAUUGCAAUGCUGCUAUUgugaggcugucacugaccugcggaagacug
.((((.(...(.(((..(.((((..(((..((((((((....((((((((((..(((.....)))....))))))))))....))))))))..)))..)))).)))).).).)))).......
.((((.(...(.(((..(.((((..(((..((((((((....((((((((((..(((.....)))....))))))))))....))))))))..)))..)))).)))).).).)))).......
Structure
------a u aaa g uu u ag uu CGUA --uu a
cugu g u agu g cagc uac UAGCAGCA AAUAUUGGAG cag a
|||| | | ||| | |||| ||| |||||||| |||||||||| ||| u
ggcg c a uca c gucg gug AUCGUCGU UUAUGACCuc guc u
gucagaa u --c g -- u ga UU AACG uauc g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
JH126623.1: 2025608-2025670 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from lch-mir-16c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature lch-miR-16c-5p
| Accession | MIMAT0070975 |
| Description | Latimeria chalumnae lch-miR-16c-5p mature miRNA |
| Sequence | 31 - UAGCAGCACGUAAAUAUUGGAG - 52 |
| Evidence | not_experimental |
Mature lch-miR-16c-3p
| Accession | MIMAT0070976 |
| Description | Latimeria chalumnae lch-miR-16c-3p mature miRNA |
| Sequence | 72 - CCAGUAUUGCAAUGCUGCUAUU - 93 |
| Evidence | not_experimental |
References
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