Accession
MI0046195
Description
Latimeria chalumnae
lch-mir-16b precursor miRNA
Sequence
auugcaggauuacuuaugccagcuccacucUAGCAGCAUGUAAAUAUUGGUGUauaaagauagacuaaaacCCCAAUGUUGUUGUGCUGCUUCAguguggcaggguuuggacaacuaaucggua
..(((..(((((((...(((.(((.((((..(((((((((..((((((((.((................)).))))))))..)))))))))..)))).)))..)))..)).....))))).)))
..(((..(((((((...(((.(((.((((..(((((((((..((((((((.((................)).))))))))..)))))))))..)))).)))..)))..)).....))))).)))
Structure
au ag ----- uau -a c cU UA U auaaaga ugc gauua cu gcc gcu cacu AGCAGCAUG AAUAUUGG GU u ||| ||||| || ||| ||| |||| ||||||||| |||||||| || aug cuaau gg ugg cgg gugA UCGUCGUGU UUGUAACC ca a -- -g caaca -uu ga u CU UG C aaaucag
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
JH127319.1: 508022-508085 []
Clustered miRNAs
1 other miRNA is < 10 kb from lch-mir-16b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature lch-miR-16b-5p
| Accession | MIMAT0070977 |
| Description | Latimeria chalumnae lch-miR-16b-5p mature miRNA |
| Sequence | 31 - UAGCAGCAUGUAAAUAUUGGUGU - 53 |
| Evidence | not_experimental |
Mature lch-miR-16b-3p
| Accession | MIMAT0070978 |
| Description | Latimeria chalumnae lch-miR-16b-3p mature miRNA |
| Sequence | 72 - CCCAAUGUUGUUGUGCUGCUUCA - 94 |
| Evidence | not_experimental |
References
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