Accession
MI0046214
Description
Latimeria chalumnae
lch-mir-200c precursor miRNA
Sequence
uugaugggagagacuuugguccucuaugagCAUCUUACUAGACAGUGCUGGAuuuuacuaaucuucucUAACACUGUCUGGUAACGAUGUUuaaaggggugaaccaagcuacugcauuccu
..((..(.((((.(((.((((((((.(((((((((((((((((((((.((((..............)))).))))))))))))).)))))))).)))))...)))))))).)).)..))..
..((..(.((((.(((.((((((((.(((((((((((((((((((((.((((..............)))).))))))))))))).)))))))).)))))...)))))))).)).)..))..
Structure
uu ug g - a u --- a - C uuuuac ga g ag ag cuu ggu ccucu ugagCAUC UUACUAGACAGUG UGGA u || | || || ||| ||| ||||| |||||||| ||||||||||||| |||| cu c uc uc gaa cca gggga auUUGUAG AAUGGUCUGUCAC AUcu a uc ua g a - - agu a C A cuucua
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
JH126562.1: 3548600-3548660 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from lch-mir-200c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature lch-miR-200c-5p
| Accession | MIMAT0071011 |
| Description | Latimeria chalumnae lch-miR-200c-5p mature miRNA |
| Sequence | 31 - CAUCUUACUAGACAGUGCUGGA - 52 |
| Evidence | not_experimental |
Mature lch-miR-200c-3p
| Accession | MIMAT0071010 |
| Description | Latimeria chalumnae lch-miR-200c-3p mature miRNA |
| Sequence | 69 - UAACACUGUCUGGUAACGAUGUU - 91 |
| Evidence | not_experimental |
References
|
|
