Accession
MI0046216
Description
Latimeria chalumnae
lch-mir-200a precursor miRNA
Sequence
ucaucacaaagaauucugggauguuauugcCAUCUUACUGGGCAGCAUUGGAuguacucugauuuucUAAUACUGCCUGGUAAUGAUGAUgaugguauccugcauucaucauagaagauu
..........((((.(.((((((((((((.(((((((((((((((.((((((.............)))))).))))))))))).)))).))))))))))))).)))).............
..........((((.(.((((((((((((.(((((((((((((((.((((((.............)))))).))))))))))).)))).))))))))))))).)))).............
Structure
---ucaucacaaa u u c - C uguac
gaau c gggauguuauug CAUC UUACUGGGCAG AUUGGA u
|||| | |||||||||||| |||| ||||||||||| |||||| c
cuua g uccuaugguagU GUAG AAUGGUCCGUC UAAUcu u
uuagaagauacua c - A U A uuuag
Annotation confidence
Not enough data
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Genome context
JH126562.1: 3546942-3547001 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from lch-mir-200a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature lch-miR-200a-5p
| Accession | MIMAT0071015 |
| Description | Latimeria chalumnae lch-miR-200a-5p mature miRNA |
| Sequence | 31 - CAUCUUACUGGGCAGCAUUGGA - 52 |
| Evidence | not_experimental |
Mature lch-miR-200a-3p
| Accession | MIMAT0071014 |
| Description | Latimeria chalumnae lch-miR-200a-3p mature miRNA |
| Sequence | 68 - UAAUACUGCCUGGUAAUGAUGAU - 90 |
| Evidence | not_experimental |
References
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