Accession
MI0046230
Description
Latimeria chalumnae
lch-let-7d precursor miRNA
Sequence
ccucugaggauccgcaguguucuagcagugUGAGGUAGUAGGUUGUGUGGUUucaggguagugauuuuugccccauugggagauaaCUAUACAACCUACUGCCUUCCCuguggagcagcaguacaacgcccaaccuu
(((...)))....((..(((((((.(((.(.((((((((((((((((((((((((((((((......))))))...))).....))))))))))))))))))))).)))))))))))))..................
(((...)))....((..(((((((.(((.(.((((((((((((((((((((((((((((((......))))))...))).....))))))))))))))))))))).)))))))))))))..................
Structure
-----ccucugaggaucc ag g u U ----- --- ug
gc uguucua cag g GAGGUAGUAGGUUGUGUGGUU uca ggguag a
|| ||||||| ||| | ||||||||||||||||||||| ||| ||||||
cg acgaggu guC C UUCCGUCAUCCAACAUAUCaa ggu cccguu u
uuccaacccgcaacauga -- - - C uagag uac uu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
JH126738.1: 1670282-1670358 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from lch-let-7d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature lch-let-7d-5p
| Accession | MIMAT0071038 |
| Description | Latimeria chalumnae lch-let-7d-5p mature miRNA |
| Sequence | 31 - UGAGGUAGUAGGUUGUGUGGUU - 52 |
| Evidence | not_experimental |
Mature lch-let-7d-3p
| Accession | MIMAT0071039 |
| Description | Latimeria chalumnae lch-let-7d-3p mature miRNA |
| Sequence | 87 - CUAUACAACCUACUGCCUUCCC - 108 |
| Evidence | not_experimental |
References
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