miRBase entry: bla-mir-2072

Stem-loop bla-mir-2072


Accession
MI0046324
Description
Branchiostoma lanceolatum bla-mir-2072 precursor miRNA


Sequence


ugucuugccuagaagagggccuugucuugcUGCAACAUCACAGUGACCACAUaggagagucaauGUGAGCACUGCGAUGUGGUAUUaagaucuggccaugccacacaguuaaucag
..((((......)))).((((..((((((.(((.(((((.(((((..(((((.((....)).)))))..))))).))))).))).))))))..))))...................

Structure
--ugucuugccuagaagag    uu      c   A     A     AC     a  a 
                   ggcc  gucuug UGC ACAUC CAGUG  CACAU gg g
                   ||||  |||||| ||| ||||| |||||  ||||| ||  
                   ccgg  uagaaU AUG UGUAG GUCAC  GUGua cu a
gacuaauugacacaccgua    uc      U   G     C     GA     a  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Sc0000547: 18221-18276 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bla-mir-2072
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bla-miR-2072-5p

Accession MIMAT0071183
Description Branchiostoma lanceolatum bla-miR-2072-5p mature miRNA
Sequence 31 - UGCAACAUCACAGUGACCACAU - 52
Evidence not_experimental

Mature bla-miR-2072-3p

Accession MIMAT0071184
Description Branchiostoma lanceolatum bla-miR-2072-3p mature miRNA
Sequence 65 - GUGAGCACUGCGAUGUGGUAUU - 86
Evidence not_experimental

References