Stem-loop bla-mir-216

Accession

MI0046341

Description

Branchiostoma lanceolatum bla-mir-216 precursor miRNA

Sequence

ugugggugugacccuguauggaugguugugUAAUCUCAGCUGGCAACUGUGAGucuaacuucacauccuCACGGUGCAAGCUGGGAUCGCUcaaacuucucagcucugcuucaguccuucu
.(.(((..(((....((..(((.(..((.((.(((((((((.(((.(((((((..............)))))))))).))))))))).)).))..).)))..))......)))..))).).

Structure

u u   ug   --cccu  au   u gu  u  A         G   A       ucuaac 
 g ggg  uga      gu  gga g  ug gU AUCUCAGCU GCA CUGUGAG      u
 | |||  |||      ||  ||| |  || || ||||||||| ||| |||||||       
 c ucc  acu      cg  ucu c  ac CG UAGGGUCGA CGU GGCACuc      u
u u   ug   ucgucu  ac   u aa  U  C         A   -       cuacac 

Annotation confidence Not enough data

Genome context

Sc0000230: 137127-137187 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bla-mir-216

Mature bla-miR-216-5p

• Accession: MIMAT0071218
• Description: Branchiostoma lanceolatum bla-miR-216-5p mature miRNA
• Sequence: 31 - UAAUCUCAGCUGGCAACUGUGAG - 53
• Evidence: not_experimental

Mature bla-miR-216-3p

• Accession: MIMAT0071217
• Description: Branchiostoma lanceolatum bla-miR-216-3p mature miRNA
• Sequence: 70 - CACGGUGCAAGCUGGGAUCGCU - 91
• Evidence: not_experimental

References