Stem-loop bla-mir-193b

Accession

MI0046343

Description

Branchiostoma lanceolatum bla-mir-193b precursor miRNA

Sequence

gucggguaaaguacaugcucacuugugaacAGCGGCUUGCGGGUCCAGUCGGuagaaagagauuuccUACUGGCCUGCCAAGUCGGUGCucacaugagcagcucgcauccauauacaug
(.(((((........((((((..(((((.((.(((((((((((.(((((.((.(((......))))).))))))))).))))))).)).))))))))))))))))).............

Structure

------------- u     aaaguaca      cu     a  G       -    U     C  u   aa 
             g cgggu        ugcuca  uguga cA CGGCUUG CGGG CCAGU GG aga  g
             | |||||        ||||||  ||||| || ||||||| |||| ||||| || |||   
             c gcucg        acgagu  acacu GU GCUGAAC GUCC GGUCA cc uuu  a
guacauauaccua -     --------      --     C  G       C    -     U  -   ag 

Annotation confidence Not enough data

Genome context

Sc0000154: 665556-665614 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from bla-mir-193b

Mature bla-miR-193b-5p

• Accession: MIMAT0071222
• Description: Branchiostoma lanceolatum bla-miR-193b-5p mature miRNA
• Sequence: 31 - AGCGGCUUGCGGGUCCAGUCGG - 52
• Evidence: not_experimental

Mature bla-miR-193b-3p

• Accession: MIMAT0071221
• Description: Branchiostoma lanceolatum bla-miR-193b-3p mature miRNA
• Sequence: 68 - UACUGGCCUGCCAAGUCGGUGC - 89
• Evidence: not_experimental

References