miRBase entry: bla-mir-96

Stem-loop bla-mir-96


Accession
MI0046376
Description
Branchiostoma lanceolatum bla-mir-96 precursor miRNA


Sequence


ggucauacagccugccucuuucuugcucugUUUGGCACUAGCACAUUUUUGCUgggcagguguguaggCCAAAAUUGUUAGUGCCAAAUAcagcgugaaagccggacguuacggauggau
(((......))).....(((((.((((.(((((((((((((((.(((((.(((..(((....))).))).)))))))))))))))))))).)))).)))))(((.......)))......

Structure
--ggucauacagccugccu     u    c               C     U   gg   g 
                   cuuuc ugcu ugUUUGGCACUAGCA AUUUU GCU  gca g
                   ||||| |||| ||||||||||||||| ||||| |||  |||  
                   gaaag gcga AUAAACCGUGAUUGU UAAAA Cgg  ugu u
uagguaggcauugcaggcc     u    c               -     C   -a   g 


Annotation confidence Not enough data
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Genome context
Sc0000043: 397228-397287 []
Clustered miRNAs
1 other miRNA is < 10 kb from bla-mir-96
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bla-miR-96-5p

Accession MIMAT0071278
Description Branchiostoma lanceolatum bla-miR-96-5p mature miRNA
Sequence 31 - UUUGGCACUAGCACAUUUUUGCU - 53
Evidence not_experimental

Mature bla-miR-96-3p

Accession MIMAT0071279
Description Branchiostoma lanceolatum bla-miR-96-3p mature miRNA
Sequence 69 - CCAAAAUUGUUAGUGCCAAAUA - 90
Evidence not_experimental

References