Stem-loop bla-mir-33-1

Accession

MI0046391

Description

Branchiostoma lanceolatum bla-mir-33-1 precursor miRNA

Sequence

cugaagaagagcaaaagaccuguugcuaggGUGCAUUGUAGUUGCAUUGCAugugcacaacagaagugCAAUGUAACUGCAGUGCAGCCcagaggcaggaccagaccacuacuuacaug
.(((((.((.........((((((.((.((.(((((((((((((((((((((.............))))))))))))))))))))).)).)).)))))).........)).))).))..

Structure

-c  -   a  agcaaaaga      g  a  G                     gugca 
  ug aag ag         ccuguu cu gg UGCAUUGUAGUUGCAUUGCAu     c
  || ||| ||         |||||| || || |||||||||||||||||||||     a
  ac uuc uc         ggacgg ga CC ACGUGACGUCAAUGUAACgug     a
gu  a   a  accagacca      a  c  G                     aagac 

Annotation confidence Not enough data

Genome context

Sc0000046: 702051-702109 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bla-mir-33-1

Mature bla-miR-33-1-5p

• Accession: MIMAT0071307
• Description: Branchiostoma lanceolatum bla-miR-33-1-5p mature miRNA
• Sequence: 31 - GUGCAUUGUAGUUGCAUUGCA - 51
• Evidence: not_experimental

Mature bla-miR-33-1-3p

• Accession: MIMAT0071308
• Description: Branchiostoma lanceolatum bla-miR-33-1-3p mature miRNA
• Sequence: 69 - CAAUGUAACUGCAGUGCAGCC - 89
• Evidence: not_experimental

References