miRBase entry: bla-mir-4900a-7

Stem-loop bla-mir-4900a-7


Accession
MI0046403
Description
Branchiostoma lanceolatum bla-mir-4900a-7 precursor miRNA


Sequence


caaaugaauuauacgagccuugcuaagaguUUUUCUUCGCCGGCACAGCUCUGugacgguauaaccaUAGCUGGCUGGCGAAGAAAUGCccuuccaaugugcugucuucauaaaaccac
...(((((....((.(((((((..(((.((.(((((((((((((.(((((..(((..........))))))))))))))))))))).)).))).))).).))))).)))))........

Structure
-----caa     uuau  g   - -   cu   a  U             A     CU   acgg 
        augaa    ac agc c uug  aag gu UUUCUUCGCCGGC CAGCU  Gug    u
        |||||    || ||| | |||  ||| || ||||||||||||| |||||  |||     
        uacuu    ug ucg g aac  uuc CG AAAGAAGCGGUCG GUCGA  Uac    a
caccaaaa     ---c  -   u u   -c   c  U             -     --   caau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Sc0000015: 693308-693366 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from bla-mir-4900a-7
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bla-miR-4900a-5p

Accession MIMAT0071329
Description Branchiostoma lanceolatum bla-miR-4900a-5p mature miRNA
Sequence 31 - UUUUCUUCGCCGGCACAGCUCUG - 53
Evidence not_experimental

Mature bla-miR-4900a-3p

Accession MIMAT0071323
Description Branchiostoma lanceolatum bla-miR-4900a-3p mature miRNA
Sequence 68 - UAGCUGGCUGGCGAAGAAAUGC - 89
Evidence not_experimental

References