miRBase entry: bla-mir-4900a-5

Stem-loop bla-mir-4900a-5


Accession
MI0046405
Description
Branchiostoma lanceolatum bla-mir-4900a-5 precursor miRNA


Sequence


caaauaaauuauacgagccuugcuaaguguUUUUCUUCGCCGGCACAGCUCUGugacaauggaaucaUAGCUGGCUGGCGAAGAAAUGCccuuucaagguacucucuacauaaaaccac
..............((((((((..(((.((.(((((((((((((.(((((..((((........)))))))))))))))))))))).)).))).)))))..)))...............

Structure
-caaauaaauuauac   --     cu   u  U             A     CU    caa 
               gag  ccuug  aag gu UUUCUUCGCCGGC CAGCU  Guga   u
               |||  |||||  ||| || ||||||||||||| |||||  ||||    
               cuc  ggaac  uuc CG AAAGAAGCGGUCG GUCGA  Uacu   g
caccaaaauacaucu   au     -u   c  U             -     --    aag 


Annotation confidence Not enough data
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Genome context
Sc0000015: 695504-695562 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from bla-mir-4900a-5
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bla-miR-4900a-5p

Accession MIMAT0071329
Description Branchiostoma lanceolatum bla-miR-4900a-5p mature miRNA
Sequence 31 - UUUUCUUCGCCGGCACAGCUCUG - 53
Evidence not_experimental

Mature bla-miR-4900a-3p

Accession MIMAT0071323
Description Branchiostoma lanceolatum bla-miR-4900a-3p mature miRNA
Sequence 68 - UAGCUGGCUGGCGAAGAAAUGC - 89
Evidence not_experimental

References