Stem-loop bla-mir-100

Accession

MI0046413

Description

Branchiostoma lanceolatum bla-mir-100 precursor miRNA

Sequence

uccuguccucagauaaagccggcugccauaAACCCGUAGAUCCGAACUUGUGUugcuucaguucACAAGCUCGUGUCUAUGGGUCUAugucaucagggcaacaucugcaugugcagu
..((((.(.(((((...(((.(.((.((((.((((((((((.(((.((((((..((....)).)))))).))).)))))))))).)))).)).)..)))...)))))...).)))).

Structure

uc    c --u     aaa   -g c  c    A          C   A      Uu  u 
  cugu c   cagau   gcc  g ug caua ACCCGUAGAU CGA CUUGUG  gc u
  |||| |   |||||   |||  | || |||| |||||||||| ||| ||||||  ||  
  gacg g   gucua   cgg  c ac guAU UGGGUAUCUG GCU GAACAc  ug c
-u    u uac     caa   ga u  u    C          U   C      -u  a 

Annotation confidence Not enough data

Genome context

Sc0000265: 96702-96758 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from bla-mir-100

Mature bla-miR-100-5p

• Accession: MIMAT0071336
• Description: Branchiostoma lanceolatum bla-miR-100-5p mature miRNA
• Sequence: 31 - AACCCGUAGAUCCGAACUUGUGU - 53
• Evidence: not_experimental

Mature bla-miR-100-3p

• Accession: MIMAT0071337
• Description: Branchiostoma lanceolatum bla-miR-100-3p mature miRNA
• Sequence: 65 - ACAAGCUCGUGUCUAUGGGUCUA - 87
• Evidence: not_experimental

References