Accession
MI0046416
Description
Branchiostoma lanceolatum
bla-mir-200c precursor miRNA
Sequence
gcaaugccgcacaguuugggguuccggcaaCAUCUUACCAGACAGCAUUUAGUuuuugaaaggaauacUAAUACUGUCUGGUAAUGAUGUUggugggguucagacagucaucaugguccau
((......))...(((((((..((((.((((((((((((((((((...(((((.(((.....))).)))))..))))))))))).))))))).)))).)))))))................
((......))...(((((((..((((.((((((((((((((((((...(((((.(((.....))).)))))..))))))))))).))))))).)))).)))))))................
Structure
---gcaaugccgcaca gu g - CAU u g
guuuggg uccg caaCAUC UUACCAGACAG UUAGU uuu a
||||||| |||| ||||||| ||||||||||| ||||| ||| a
cagacuu gggu gUUGUAG AAUGGUCUGUC AAUca aag a
uaccugguacuacuga -g g U -AU u g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Sc0000010: 3877922-3877982 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from bla-mir-200c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bla-miR-200c-5p
| Accession | MIMAT0071343 |
| Description | Branchiostoma lanceolatum bla-miR-200c-5p mature miRNA |
| Sequence | 31 - CAUCUUACCAGACAGCAUUUAGU - 53 |
| Evidence | not_experimental |
Mature bla-miR-200c-3p
| Accession | MIMAT0071342 |
| Description | Branchiostoma lanceolatum bla-miR-200c-3p mature miRNA |
| Sequence | 69 - UAAUACUGUCUGGUAAUGAUGUU - 91 |
| Evidence | not_experimental |
References
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