Accession
MI0046417
Description
Branchiostoma lanceolatum
bla-mir-200b precursor miRNA
Sequence
gaaacagcucuagaccuggcggaguugugcCAUCUUACCUGGCGGGguuuagacgguucugagcucUAACACUGUCUGGUAAUGAUGACgggacuccgcaaaucuacaacauacgaucg
..........((((....((((((((.((.(((((((((.(((((((((((((....))))))))))......))).))))).)))).)).))))))))...)))).............
..........((((....((((((((.((.(((((((((.(((((((((((((....))))))))))......))).))))).)))).)).))))))))...)))).............
Structure
---gaaacagcuc ccug g c - U ------ c
uaga gcggaguu ug CAUC UUACC GGC GGGguuuaga g
|||| |||||||| || |||| ||||| ||| ||||||||||
aucu cgccucag gC GUAG AAUGG CUG Ucucgagucu g
gcuagcauacaac -aaa g A U U UCACAA u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Sc0000010: 3875289-3875347 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from bla-mir-200b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bla-miR-200b-5p
| Accession | MIMAT0071345 |
| Description | Branchiostoma lanceolatum bla-miR-200b-5p mature miRNA |
| Sequence | 31 - CAUCUUACCUGGCGGG - 46 |
| Evidence | not_experimental |
Mature bla-miR-200b-3p
| Accession | MIMAT0071344 |
| Description | Branchiostoma lanceolatum bla-miR-200b-3p mature miRNA |
| Sequence | 67 - UAACACUGUCUGGUAAUGAUGAC - 89 |
| Evidence | not_experimental |
References
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