Accession
MI0046418
Description
Branchiostoma lanceolatum
bla-mir-200a precursor miRNA
Sequence
ugggaaggacauguuagcuugauuccugacAUCUUACUUGGCAGCAUUCGAuguguuuccauauucAAAUACUGCCUGGUAAUGAUGCcagucaaguuuccucacaguccagaugucu
......((((.(((.(((((((...(((.(((((((((.(((((.(((.((((((....))))))..))).))))).))))).)))).)))))))))).....)))))))........
......((((.(((.(((((((...(((.(((((((((.(((((.(((.((((((....))))))..))).))))).))))).)))).)))))))))).....)))))))........
Structure
--ugggaa a ----u uuc a - U C -C u
ggac ugu agcuuga cug cAUC UUACU GGCAG AUU GAugug u
|||| ||| ||||||| ||| |||| ||||| ||||| ||| ||||||
ccug aca uugaacu gac GUAG AAUGG CCGUC UAA uuauac u
ucuguaga - cuccu --- C U U A Ac c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Sc0000010: 3872369-3872426 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from bla-mir-200a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bla-miR-200a-5p
| Accession | MIMAT0071347 |
| Description | Branchiostoma lanceolatum bla-miR-200a-5p mature miRNA |
| Sequence | 31 - AUCUUACUUGGCAGCAUUCGA - 51 |
| Evidence | not_experimental |
Mature bla-miR-200a-3p
| Accession | MIMAT0071346 |
| Description | Branchiostoma lanceolatum bla-miR-200a-3p mature miRNA |
| Sequence | 67 - AAAUACUGCCUGGUAAUGAUGC - 88 |
| Evidence | not_experimental |
References
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