miRBase entry: mmr-mir-200c

Stem-loop mmr-mir-200c


Accession
MI0046785
Description
Microcebus murinus mmr-mir-200c precursor miRNA


Sequence


agucugcccgccauccugggccucugugggCAUCUUACCGGACAGUGCUGGAuuucuccgcucaacucUAACACUGUCUGGUAACGAUGUUcaaaggugacccaccgugcuccgggagacg
.((((.((((.(((..(((((.(((.(((((((((((((((((((((.((((.((........)).)))).))))))))))))).)))))))).))).).))))..)))...)))))))).

Structure
a    g    --c   cc    - c   g        -             C    u  cuc 
 gucu cccg   cau  uggg c ucu ugggCAUC UUACCGGACAGUG UGGA uu   c
 |||| ||||   |||  |||| | ||| |||||||| ||||||||||||| |||| ||    
 caga gggc   gug  accc g gga acUUGUAG AAUGGUCUGUCAC AUcu aa   g
g    -    cuc   cc    a u   a        C             A    c  cuc 


Annotation confidence Not enough data
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Genome context
CM007662.1: 54749634-54749694 []
Clustered miRNAs
2 other miRNAs are < 10 kb from mmr-mir-200c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmr-miR-200c-5p

Accession MIMAT0072074
Description Microcebus murinus mmr-miR-200c-5p mature miRNA
Sequence 31 - CAUCUUACCGGACAGUGCUGGA - 52
Evidence not_experimental

Mature mmr-miR-200c-3p

Accession MIMAT0072073
Description Microcebus murinus mmr-miR-200c-3p mature miRNA
Sequence 69 - UAACACUGUCUGGUAACGAUGUU - 91
Evidence not_experimental

References