Stem-loop ami-mir-363

Accession

MI0046804

Description

Alligator mississippiensis ami-mir-363 precursor miRNA

Sequence

ccgggugguuaugcuuuguuuugcuguuguCGGGUGGAUCACGAUGCAAUUUUgauuaguuuagaaggagaaaAAUUGCACGGUAUCCAUCUGUAaaccgcaggaccuucaucgcugacaacgua
.((.(((((.(((....(((((((.(((..(((((((((..((.(((((((((..((..........))..)))))))))))..)))))))))..))).)))))))...))).))).))..))..

Structure

-c  -g  -   u   cuuu       u   gu         CA  A         ga  aguu 
  cg  gu ggu aug    guuuugc guu  CGGGUGGAU  CG UGCAAUUUU  uu    u
  ||  || ||| |||    ||||||| |||  |||||||||  || |||||||||  ||     
  gc  ca ucg uac    caggacg caa  GUCUACCUA  GC ACGUUAAaa  ag    a
au  aa  g   c   -uuc       c   AU         UG  -         ag  gaag 

Annotation confidence Not enough data

Genome context

NW_017711293.1: 2599564-2599628 []

Clustered miRNAs

5 other miRNAs are < 10 kb from ami-mir-363

Mature ami-miR-363-5p

• Accession: MIMAT0072108
• Description: Alligator mississippiensis ami-miR-363-5p mature miRNA
• Sequence: 31 - CGGGUGGAUCACGAUGCAAUUUU - 53
• Evidence: not_experimental

Mature ami-miR-363-3p

• Accession: MIMAT0072107
• Description: Alligator mississippiensis ami-miR-363-3p mature miRNA
• Sequence: 74 - AAUUGCACGGUAUCCAUCUGUA - 95
• Evidence: not_experimental

References