Accession
MI0046808
Description
Alligator mississippiensis
ami-mir-20e precursor miRNA
Sequence
guuuuuuccuuuuuuuuguccuagcaguauCAAAGUGCUCAUAGUGCAGGUAGcuuuuguauuggaucuACUGUAAUGUGGGCACUUACAGuacugccagauaaaaugcaucguuggccggu
.............(((((((...(((((((..(((((((((((.(((((.(((.(((......))).)))))))).)))))))))))...)))))))..)))))))...((((.....))))
.............(((((((...(((((((..(((((((((((.(((((.(((.(((......))).)))))))).)))))))))))...)))))))..)))))))...((((.....))))
Structure
---guuuuuuccuuuu cua -CA G G c ug
uuuuguc gcaguau AAGUGCUCAUA UGCAG UAG uuu u
||||||| ||||||| ||||||||||| ||||| ||| |||
aaaauag cgucauG UUCACGGGUGU AUGUC Auc agg a
uggccgguugcuacgu -ac ACA A - u uu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
NW_017711293.1: 2599995-2600056 []
Clustered miRNAs
5 other miRNAs are < 10 kb from ami-mir-20e
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ami-miR-20e-5p
| Accession | MIMAT0072115 |
| Description | Alligator mississippiensis ami-miR-20e-5p mature miRNA |
| Sequence | 31 - CAAAGUGCUCAUAGUGCAGGUAG - 53 |
| Evidence | not_experimental |
Mature ami-miR-20e-3p
| Accession | MIMAT0072116 |
| Description | Alligator mississippiensis ami-miR-20e-3p mature miRNA |
| Sequence | 70 - ACUGUAAUGUGGGCACUUACAG - 91 |
| Evidence | not_experimental |
References
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