Stem-loop ami-mir-20b

Accession

MI0046810

Description

Alligator mississippiensis ami-mir-20b precursor miRNA

Sequence

ucuuucugguggaugggccuuguguuguguAAAAGUGCUUACAGUGCAGGUAGuguuuugguaucuACUGCAGUAUAAGCACUUCUAGcauuaccauggcaauucaaucagugauuugu
..((.(((((((((..(((.((.((.((((..(((((((((.(.(((((.(((...........)))))))).).)))))))))...)))).)))).))).)))).))))).)).....

Structure

---uc  u     -    gg   u  u  u    -AA         C G     G   uguu 
     uu cuggu ggau  gcc ug gu gugu   AAGUGCUUA A UGCAG UAG    u
     || ||||| ||||  ||| || || ||||   ||||||||| | ||||| |||    u
     ag gacua cuua  cgg ac ca uacG   UUCACGAAU U ACGUC Auc    g
uguuu  u     a    -a   u  -  u    AUC         A G     -   uaug 

Annotation confidence Not enough data

Genome context

NW_017711293.1: 2600367-2600425 []

Clustered miRNAs

5 other miRNAs are < 10 kb from ami-mir-20b

Mature ami-miR-20b-5p

• Accession: MIMAT0072119
• Description: Alligator mississippiensis ami-miR-20b-5p mature miRNA
• Sequence: 31 - AAAAGUGCUUACAGUGCAGGUAG - 53
• Evidence: not_experimental

Mature ami-miR-20b-3p

• Accession: MIMAT0072120
• Description: Alligator mississippiensis ami-miR-20b-3p mature miRNA
• Sequence: 67 - ACUGCAGUAUAAGCACUUCUAG - 88
• Evidence: not_experimental

References