miRBase entry: pbv-mir-5420b

Stem-loop pbv-mir-5420b


Accession
MI0046900
Description
Python bivittatus pbv-mir-5420b precursor miRNA


Sequence


uuugcugcacaaccuuccuaggugggcacuGCUCAAACUUUAGCACUUUCCuguucagccacuuagggUAAGUGCUACACUGUUUGGGUAGcucccagccaggcuuuccaaguguuuuaug
......((((......(((.(.((((..((((((((((..(((((((((((((..........))))).))))))))....))))))))))..)))).).)))........))))......

Structure
uuugcu    --aaccuu   a g    ca          --UU        -     uuca 
      gcac        ccu g uggg  cuGCUCAAAC    UAGCACUU UCCug    g
      ||||        ||| | ||||  ||||||||||    |||||||| |||||     
      ugug        gga c accc  GAUGGGUUUG    AUCGUGAA gggau    c
guauuu    aaccuuuc   c g    uc          UCAC        U     ucac 


Annotation confidence Not enough data
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Genome context
KE954489.1: 53802-53862 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from pbv-mir-5420b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pbv-miR-5420b-5p

Accession MIMAT0072270
Description Python bivittatus pbv-miR-5420b-5p mature miRNA
Sequence 31 - GCUCAAACUUUAGCACUUUCC - 51
Evidence not_experimental

Mature pbv-miR-5420b-3p

Accession MIMAT0072269
Description Python bivittatus pbv-miR-5420b-3p mature miRNA
Sequence 69 - UAAGUGCUACACUGUUUGGGUAG - 91
Evidence not_experimental

References