Stem-loop sha-mir-9a-3

Accession

MI0047249

Description

Sarcophilus harrisii sha-mir-9a-3 precursor miRNA

Sequence

gcugcagcagggaggcgggguugauuguuaUCUUUGGUUAUCUAGCUGUAUGAguggugucgagucuucAUAAAGCUAGAUAACCGAAAGUAaaaauaaccccauacacugcggagcacgag
(((.(.((((....(.(((((((....((((.(((((((((((((((.((((((.(.(....).).)))))).))))))))))))))).))))...))))))).)...))))).))).....

Structure

-----   g a    ggag c       auug    C               G      u g g 
     gcu c gcag    g gggguug    uuaU UUUGGUUAUCUAGCU UAUGAg g u u
     ||| | ||||    | |||||||    |||| ||||||||||||||| |||||| | |  
     cga g cguc    u ccccaau    aAUG AAGCCAAUAGAUCGA AUAcuu u a c
gagca   g -    -aca a       -aaa    A               A      c g g 

Annotation confidence Not enough data

Genome context

GL856822.1: 1577136-1577197 []

Mature sha-miR-9a-5p

• Accession: MIMAT0022783
• Description: Sarcophilus harrisii sha-miR-9a-5p mature miRNA
• Sequence: 31 - UCUUUGGUUAUCUAGCUGUAUGA - 53
• Evidence: experimental ; Illumina [1]

Mature sha-miR-9a-3-3p

• Accession: MIMAT0072903
• Description: Sarcophilus harrisii sha-miR-9a-3-3p mature miRNA
• Sequence: 70 - AUAAAGCUAGAUAACCGAAAGUA - 92
• Evidence: not_experimental

References