miRBase entry: neu-mir-200c

Stem-loop neu-mir-200c


Accession
MI0047581
Description
Notamacropus eugenii neu-mir-200c precursor miRNA


Sequence


gcccccuggcacgaagugggccucugugggCAUCUUACUAGACAGUGCUGGAuuuuuggaugcauucUAACACUGUCUGGUAACGAUGUUuaaagagggaacccaacccggcaagugccu
.......(((((....(((((((((.(((((((((((((((((((((.((((.............)))).))))))))))))).)))))))).)))))........))))....))))).

Structure
gcccccu     gaag    --------     g        -             C    uuuuu 
       ggcac    uggg        ccucu ugggCAUC UUACUAGACAGUG UGGA     g
       |||||    ||||        ||||| |||||||| ||||||||||||| ||||     g
       ccgug    gccc        ggaga auUUGUAG AAUGGUCUGUCAC AUcu     a
------u     aacg    aacccaag     a        C             A    uacgu 


Annotation confidence Not enough data
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Genome context
CM051817.1: 34157847-34157906 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from neu-mir-200c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature neu-miR-200c-5p

Accession MIMAT0073518
Description Notamacropus eugenii neu-miR-200c-5p mature miRNA
Sequence 31 - CAUCUUACUAGACAGUGCUGGA - 52
Evidence not_experimental

Mature neu-miR-200c-3p

Accession MIMAT0073517
Description Notamacropus eugenii neu-miR-200c-3p mature miRNA
Sequence 68 - UAACACUGUCUGGUAACGAUGUU - 90
Evidence not_experimental

References