miRBase entry: neu-mir-200a

Stem-loop neu-mir-200a


Accession
MI0047583
Description
Notamacropus eugenii neu-mir-200a precursor miRNA


Sequence


uccucaaccuugauucggggcugccauuacCAUCUUACUGGGCAGCAUUGGAuggugucuguguuucUAAUACUGCCUGGUAAUGAUGAUgauggggucccgcggacaacguggaaagug
(((...((.(((...(((((((.((((((.(((((((((((((((.((((((.............)))))).))))))))))).)))).)))))))))))))....))).))))).....

Structure
-----   uca  c   -auu       g      c    -           C      uggug 
     ucc   ac uug    cggggcu ccauua CAUC UUACUGGGCAG AUUGGA     u
     |||   || |||    ||||||| |||||| |||| ||||||||||| ||||||     c
     agg   ug aac    gcccugg gguagU GUAG AAUGGUCCGUC UAAUcu     u
gugaa   ---  c   aggc       -      A    U           A      uugug 


Annotation confidence Not enough data
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Genome context
CM051817.1: 34154584-34154643 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from neu-mir-200a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature neu-miR-200a-5p

Accession MIMAT0073522
Description Notamacropus eugenii neu-miR-200a-5p mature miRNA
Sequence 31 - CAUCUUACUGGGCAGCAUUGGA - 52
Evidence not_experimental

Mature neu-miR-200a-3p

Accession MIMAT0073521
Description Notamacropus eugenii neu-miR-200a-3p mature miRNA
Sequence 68 - UAAUACUGCCUGGUAAUGAUGAU - 90
Evidence not_experimental

References