miRBase entry: ete-mir-1912

Stem-loop ete-mir-1912


Accession
MI0047610
Description
Echinops telfairi ete-mir-1912 precursor miRNA


Sequence


uaucacaacuggacuuagcucuaggauguaCUCAUUGCAUGGGCUGUGUAUAuuuuuauuuaaUACCCAGAGCAUGCAUUGUGGAcauaauagagauugaaagacagccagaagg
........((((.((((((((((..((((.(.((.((((((..(((.((((...........)))).)))..)))))).)).).))))..))))).)))......))))))....

Structure
uaucacaa    a  ------   -     gg    a U  U      GG   U    Auuu 
        cugg cu      uag cucua  augu C CA UGCAUG  CUG GUAU    u
        |||| ||      ||| |||||  |||| | || ||||||  ||| ||||    u
        gacc ga      guu gagau  uacA G GU ACGUAC  GAC CAUa    a
----ggaa    -  cagaaa   a     aa    G U  U      GA   C    auuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ref|NW_004558744.1|: 11900370-11900484 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ete-mir-1912
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ete-miR-1912-5p

Accession MIMAT0073572
Description Echinops telfairi ete-miR-1912-5p mature miRNA
Sequence 31 - CUCAUUGCAUGGGCUGUGUAUA - 52
Evidence not_experimental

Mature ete-miR-1912-3p

Accession MIMAT0073571
Description Echinops telfairi ete-miR-1912-3p mature miRNA
Sequence 64 - UACCCAGAGCAUGCAUUGUGGA - 85
Evidence not_experimental

References