miRBase entry: ete-mir-1301

Stem-loop ete-mir-1301


Accession
MI0047613
Description
Echinops telfairi ete-mir-1301 precursor miRNA


Sequence


caggcgaccccuggaauggggauuguggggGGUCACUCUAGGCACCGCAGCAcugugcuggggaugUUGCAGCUGCCUGGGAGUGAUUCCacacaguccucucugccuccagggucaccc
..((.(((((.((((..((((((((((.(((((((((((((((((.((((((((.......)).)))))).).))))).))))))))))).))))))))))......))))))))).)).

Structure
ca  c     c    ----au          g           -     - C      -  gu 
  gg gaccc ugga      ggggauugug ggGGUCACUCU AGGCA C GCAGCA cu  g
  || ||||| ||||      |||||||||| ||||||||||| ||||| | |||||| ||  c
  cc cuggg accu      cuccugacac CCUUAGUGAGG UCCGU G CGUUgu gg  u
-c  a     -    ccgucu          a           G     C A      a  gg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ref|NW_004558701.1|: 22580063-22580182 [-]

Database links

Mature ete-miR-1301-5p

Accession MIMAT0073578
Description Echinops telfairi ete-miR-1301-5p mature miRNA
Sequence 31 - GGUCACUCUAGGCACCGCAGCA - 52
Evidence not_experimental

Mature ete-miR-1301-3p

Accession MIMAT0073577
Description Echinops telfairi ete-miR-1301-3p mature miRNA
Sequence 67 - UUGCAGCUGCCUGGGAGUGAUUCC - 90
Evidence not_experimental

References