miRBase entry: ete-mir-599

Stem-loop ete-mir-599


Accession
MI0047633
Description
Echinops telfairi ete-mir-599 precursor miRNA


Sequence


ucacgucaaugacauccuguccacagugugUUUGAUAAGCUGACAUGGGACAggauuucucuucacugUUGUGUCAGUUUAUCAAACCcauaccuggacgacagucaauccagcuaaag
.........((((....((((((..(((.(((((((((((((((((..(((((((.......)).)))))))))))))))))))))).)))...))))))...))))............

Structure
---ucacgucaa    aucc      -ca   u                 GG     -  uu 
            ugac    ugucca   gug gUUUGAUAAGCUGACAU  GACAg ga  u
            ||||    ||||||   ||| |||||||||||||||||  ||||| ||  c
            acug    gcaggu   uac CAAACUAUUUGACUGUG  UUguc cu  u
gaaaucgaccua    -aca      cca   C                 --     a  uc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ref|NW_004558703.1|: 39471528-39471646 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ete-mir-599
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ete-miR-599-5p

Accession MIMAT0073617
Description Echinops telfairi ete-miR-599-5p mature miRNA
Sequence 31 - UUUGAUAAGCUGACAUGGGACA - 52
Evidence not_experimental

Mature ete-miR-599-3p

Accession MIMAT0073618
Description Echinops telfairi ete-miR-599-3p mature miRNA
Sequence 69 - UUGUGUCAGUUUAUCAAACC - 88
Evidence not_experimental

References