Accession
MI0047639
Description
Echinops telfairi
ete-mir-542 precursor miRNA
Sequence
ggcucauuggcaauccagaccuuaggcauuUCGGGGAUCCCUGUCAUGGGauaccacugcauacuUGUGACAGAUUGAUAACUGAAAgguuuagggccucuuggucuccuaguaacc
.....(((((....(((((((((((((.((((((..(((.((((((((((((........)).))))))))))...)))..)))))).))))))))..)).)))....)))))....
.....(((((....(((((((((((((.((((((..(((.((((((((((((........)).))))))))))...)))..)))))).))))))))..)).)))....)))))....
Structure
ggcuc caau - -- a GG --C - acc
auugg cca ga ccuuaggc uuUCGG AUC CUGUCAUGGG au a
||||| ||| || |||||||| |||||| ||| |||||||||| ||
ugauc ggu cu gggauuug AAAGUC UAG GACAGUGUuc ua c
-ccaa cucu u cc g AA UUA a cgu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
ref|NW_004558802.1|: 620255-620371 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ete-mir-542
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ete-miR-542-5p
| Accession | MIMAT0073630 |
| Description | Echinops telfairi ete-miR-542-5p mature miRNA |
| Sequence | 31 - UCGGGGAUCCCUGUCAUGGG - 50 |
| Evidence | not_experimental |
Mature ete-miR-542-3p
| Accession | MIMAT0073629 |
| Description | Echinops telfairi ete-miR-542-3p mature miRNA |
| Sequence | 66 - UGUGACAGAUUGAUAACUGAAA - 87 |
| Evidence | not_experimental |
References
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