miRBase entry: ete-mir-222

Stem-loop ete-mir-222


Accession
MI0047692
Description
Echinops telfairi ete-mir-222 precursor miRNA


Sequence


ggguguugggaugugaaguuguuccucaauGGCUCAGUAGCCAGUGUAGAUCCugucuuuuguaaucagcAGCUACAUCUGGCUACUGGGUCUCugauggcaucuccuuacuucugccauugca
..(((.(((((.((((.(..((.(((((..(((((((((((((((((((...(((...........)))...))))).))))))))))))))..))).)).))..).)))).))..))).))).

Structure
gg   u   --  u    a uu  u  -   au              -     AUC   ucuu 
  gug ugg  ga guga g  gu cc uca  GGCUCAGUAGCCAG UGUAG   Cug    u
  ||| |||  || |||| |  || || |||  |||||||||||||| |||||   |||    u
  cgu acc  cu cauu c  ua gg agu  CUGGGUCAUCGGUC ACAUC   gac    g
-a   u   gu  u    c uc  c  u   CU              U     GAc   uaau 


Annotation confidence Not enough data
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Genome context
ref|NW_004558773.1|: 7503714-7503837 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ete-mir-222
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ete-miR-222-5p

Accession MIMAT0073735
Description Echinops telfairi ete-miR-222-5p mature miRNA
Sequence 31 - GGCUCAGUAGCCAGUGUAGAUCC - 53
Evidence not_experimental

Mature ete-miR-222-3p

Accession MIMAT0073734
Description Echinops telfairi ete-miR-222-3p mature miRNA
Sequence 71 - AGCUACAUCUGGCUACUGGGUCUC - 94
Evidence not_experimental

References