miRBase entry: ete-mir-217

Stem-loop ete-mir-217


Accession
MI0047697
Description
Echinops telfairi ete-mir-217 precursor miRNA


Sequence


aacgucacaaagagcuuuugauguugcaggUACUGCAUCAGGAACUGAUCGGAuaaguaucugucaCCAUCAGUUCCUAAUGCACUGCCuucagcaucuaacugagcuucaggaaacac
...........((((((..(((((((.(((((.(((((.((((((((((.(((((......)))).).)))))))))).))))).))))).))))))).....))))))..........

Structure
aacgucacaaa      ---uu       c     C     C          C -    ag 
           gagcuu     gauguug aggUA UGCAU AGGAACUGAU G GAua  u
           ||||||     ||||||| ||||| ||||| |||||||||| | ||||   
           uucgag     cuacgac uCCGU ACGUA UCCUUGACUA C cugu  a
-cacaaaggac      ucaau       u     C     A          C a    cu 


Annotation confidence Not enough data
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Genome context
ref|NW_004558745.1|: 15886973-15887091 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ete-mir-217
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ete-miR-217-5p

Accession MIMAT0073743
Description Echinops telfairi ete-miR-217-5p mature miRNA
Sequence 31 - UACUGCAUCAGGAACUGAUCGGA - 53
Evidence not_experimental

Mature ete-miR-217-3p

Accession MIMAT0073744
Description Echinops telfairi ete-miR-217-3p mature miRNA
Sequence 67 - CCAUCAGUUCCUAAUGCACUGCC - 89
Evidence not_experimental

References